axon_synthesis.synthesis.main_trunk.steiner_tree

Compute the Steiner Tree.

The solution is computed using the package pcst_fast: https://github.com/fraenkel-lab/pcst_fast

Functions

compute_solution(nodes, edges, *[, ...])	Compute the Steiner Tree solution from the given nodes and edges.
plot_solution(nodes, edges, figure_path[, ...])	Plot the given triangulation for debugging purpose.

axon_synthesis.synthesis.main_trunk.steiner_tree.compute_solution(nodes: DataFrame, edges: DataFrame, *, output_path_nodes: str | PathLike | None = None, output_path_edges: str | PathLike | None = None, figure_path: str | PathLike | None = None, logger: Logger | LoggerAdapter | None = None)

Compute the Steiner Tree solution from the given nodes and edges.

axon_synthesis.synthesis.main_trunk.steiner_tree.plot_solution(nodes, edges, figure_path, logger=None)

Plot the given triangulation for debugging purpose.