Blue Brain
– Axon Synthesis
0.1.10
Blue Brain
– Axon Synthesis – axon_synthesis.cli
0.1.10
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Axon Synthesis
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General principles of the synthesis algorithm
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axon_synthesis
axon_synthesis.atlas
axon_synthesis.base_path_builder
axon_synthesis.constants
axon_synthesis.typing
axon_synthesis.utils
axon_synthesis.validation
axon_synthesis.validation.mimic
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axon_synthesis.white_matter_recipe
axon_synthesis.cli
axon_synthesis.cli.common
axon_synthesis.cli.input_creation
axon_synthesis.cli.synthesis
axon_synthesis.cli.utils
axon_synthesis.cli.validation
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axon_synthesis.inputs.clustering
axon_synthesis.inputs.clustering.extract_terminals
axon_synthesis.inputs.clustering.from_barcodes
axon_synthesis.inputs.clustering.from_brain_regions
axon_synthesis.inputs.clustering.from_sphere_parents
axon_synthesis.inputs.clustering.from_spheres
axon_synthesis.inputs.clustering.plot
axon_synthesis.inputs.clustering.utils
axon_synthesis.inputs.create
axon_synthesis.inputs.pop_neuron_numbers
axon_synthesis.inputs.trunk_properties
axon_synthesis.synthesis
axon_synthesis.synthesis.add_tufts
axon_synthesis.synthesis.main_trunk
axon_synthesis.synthesis.main_trunk.create_graph
axon_synthesis.synthesis.main_trunk.create_graph.plot
axon_synthesis.synthesis.main_trunk.create_graph.utils
axon_synthesis.synthesis.main_trunk.post_process
axon_synthesis.synthesis.main_trunk.steiner_morphology
axon_synthesis.synthesis.main_trunk.steiner_tree
axon_synthesis.synthesis.outputs
axon_synthesis.synthesis.plot
axon_synthesis.synthesis.source_points
axon_synthesis.synthesis.target_points
axon_synthesis.synthesis.tuft_properties
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Contributing
axon_synthesis.cli
ΒΆ
Main entry point of the Command Line Interface for the axon_synthesis package.